deps: Bump Microsoft.ML.OnnxRuntime from 1.28.0 to 1.29.0

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Updated Microsoft.ML.OnnxRuntime from 1.28.0 to 1.29.0.

Release notes

Sourced from Microsoft.ML.OnnxRuntime's releases.

1.29.0

Announcements & Breaking Changes

• onnxruntime-web has announced the deprecation of WebGL and JSEP. The native WebGPU EP is the recommended path going forward. See the deprecation and migration plans for details (#​29716, #​31683).
• POSIX telemetry is now available on Linux, macOS, Android, and iOS when ONNX Runtime is built with telemetry enabled. It does not change the public ABI, WebAssembly remains telemetry-free, and setting ORT_DISABLE_TELEMETRY=1 before initialization disables non-Windows telemetry for the process (#​27379, #​29872).
• The unused internal onnxruntime/python/tools/tensorrt dashboard tooling was removed. This does not affect the TensorRT Execution Provider APIs (#​29395).

Security Fixes

Path, bounds, and input validation

• Fixed a path traversal vulnerability in TensorRT and NvTensorRTRTX engine refitting by making external-data path validation unconditional (#​29396).
• Validated the CPU MoE k attribute against the number of experts and fixed a CPU TensorScatter security issue (#​29907, #​29916).
• Added missing rank, shape, and parameter validation for pooling, LSTM and DynamicQuantizeLSTM, Sampling, FeatureVectorizer, SkipLayerNorm, QLinearConv, Whisper decoding, RNN activations, GridSample, contrib Range, and CropAndResize (#​29254, #​29255, #​29265, #​29579, #​29595, #​29605, #​29871, #​31636, #​31671, #​31675, #​31676, #​31684).
• Hardened CUDA indexing and buffer handling in GridSample, transpose, GatherBlockQuantized, InstanceNormalization, LayerNorm/RMSNorm, BeamSearch, DeformConv, AveragePool, and MaxPool (#​29581, #​29631, #​29638, #​31640, #​31642, #​31644, #​31645, #​31647, #​31650).
• Fixed packed sub-byte tensor over-copying in OrtApi::GetValue and validated DML constant tensor byte sizes (#​29157, #​31665).

Supply chain and tooling

• Updated npm lockfiles, refreshed the Next.js end-to-end fixture lockfile for security advisories, and upgraded adm-zip for onnxruntime-node (#​29827, #​29926, #​31192).

New Features

Core APIs & Runtime

• Default intra-op and inter-op thread-pool sizes can now be set with ORT_INTRA_OP_NUM_THREADS and ORT_INTER_OP_NUM_THREADS. Explicit thread settings still take precedence, and 0 preserves machine-sized defaults (#​29688).
• Added weightless-model support for all initializer types, allowed zero-input EpContext nodes, and wired maximum-shape inference into workspace estimation (#​29607, #​29799, #​31613).
• Added ONNX-domain support for rotary embedding and a fused MRotaryEmbedding contrib operator for Qwen mRoPE variants (#​29261, #​31728).
• Added multi-shape profiling to onnxruntime_perf_test through --data_shape, plus verbose graph-transformer tracing and broader inference-session error-path coverage (#​29555, #​29558, #​29569, #​29571).

Execution Provider ABI & Plugin EPs

• WebGPU now supports device-free compile-only sessions for offline graph transformation (#​29681).
• Expanded CUDA plugin EP packaging and testing, including Windows ARM64 package and size options, updated package outputs, and aligned architecture selections across Python, C API, TensorRT, Node.js, and plugin packages (#​31635, #​31722, #​31992).
• Improved plugin lifecycle handling by unloading failed EP library loads and fixing allocator-deleter lifetime (#​29634, #​29770).

Execution Provider Updates

NVIDIA CUDA EP

Attention and decoding

• Added PagedAttention with quantized KV cache, XQA decode, MLA, QK-Norm, and head-sink support (#​29912).
• Extended quantized KV-cache support with attention sinks, independent and per-channel scales, sliding-window cache support, and a fused K/V dequantization launch (#​29900, #​29904, #​31480).
• Added a cuDNN SDPA decode tier to the standard ONNX Attention CUDA kernel and enabled cuDNN SDPA for contrib Attention (#​29715, #​29717).
• Added attention_bias support to the GroupQueryAttention unfused path and state_window support to LinearAttention and CausalConvWithState for MTP (#​29525, #​31157).
• Fixed LinearAttention on GPUs with limited shared memory (#​31982).

MoE and quantized GEMM

• Added NVFP4 QMoE, including native FP4xFP4 prefill on SM120, faster decode GEMV, fused routing/finalization paths, and reduced activation and weight-dequantization overhead (#​29697, #​29824, #​29887, #​29919, #​31156, #​31159, #​31349, #​31479).
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