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    38 repositories

    • multiple-instance-fine-mapping

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Mar 10, 2026Mar 10, 2026

    • DeepLearning-Code

      Public
      Home work exercises for Deep Learning course at HPI
      Jupyter Notebook
      •0•0•0•0•Updated Jan 10, 2026Jan 10, 2026

    • Math4ML

      Public
      Lecture script for the Mathematics for Machine Learning lecture at HPI
      Jupyter Notebook
      •2•2•0•0•Updated Jul 18, 2025Jul 18, 2025

    • visian

      Public
      TypeScript
      •
      Apache License 2.0
      •0•4•56•8•Updated Jun 25, 2025Jun 25, 2025

    • Math4ML-Code

      Public
      Python Code for the Mathematics for Machine Learning Lecture
      Python
      •1•0•0•1•Updated Jun 24, 2025Jun 24, 2025

    • Deep-Learning-Lecture

      Public
      HPI Deep Learning Lecture
      Creative Commons Zero v1.0 Universal
      •4•15•1•0•Updated Dec 11, 2024Dec 11, 2024

    • ml-seminar-brain-mri-dementia-ivae

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • MFD

      Public
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Sep 11, 2024Sep 11, 2024

    • transfer-gwas-brain-mri

      Public
      0•0•0•0•Updated Jun 13, 2024Jun 13, 2024

    • neurocor

      Public
      A repository to calculate genetic correlations with brain imaging phenotypes
      Python
      •0•0•0•0•Updated Jul 24, 2023Jul 24, 2023

    • seak

      Public
      Python
      •
      Apache License 2.0
      •0•3•2•0•Updated Apr 18, 2023Apr 18, 2023

    • faatpipe

      Public
      Functional Annotation and Association Testing Pipeline
      Python
      •
      Apache License 2.0
      •0•1•0•0•Updated Apr 18, 2023Apr 18, 2023

    • AntiSplodge

      Public
      Spatial Transcriptomics deconvolution pipeline
      Jupyter Notebook
      •
      MIT License
      •1•2•0•0•Updated Dec 1, 2022Dec 1, 2022

    • lucid-torch

      Public
      Jupyter Notebook
      •
      MIT License
      •0•1•0•3•Updated Nov 22, 2022Nov 22, 2022

    • ukb-200k-wes-vep

      Public
      UK Biobank 200k whole exome sequencing variant effect predictions
      0•8•0•0•Updated Jul 27, 2022Jul 27, 2022

    • ContIG

      Public
      This is the official implementation of the method ContIG, for self-supervised learning from medical imaging with genomics
      Python
      •
      Apache License 2.0
      •7•58•1•0•Updated Jul 7, 2022Jul 7, 2022

    • active-segmentation

      Public
      ActiveSegmentation: A Simulation Framework for Benchmarking Active Learning Strategies for 3D Medical Image Segmentation
      deep-learningpytorchmedical-imaging
      deep-learningpytorchmedical-imagingsemantic-segmentationactive-learningmedical-image-segmentationpytorch-lightning3d-image-segmentation
      Python
      •
      GNU Affero General Public License v3.0
      •1•20•9•0•Updated Jul 5, 2022Jul 5, 2022

    • AntiSplodge_Turorial

      Public
      Tutorial for AntiSplodge with all the required datasets to get going!
      Jupyter Notebook
      •0•0•0•0•Updated Jun 30, 2022Jun 30, 2022

    • self-supervised-3d-tasks

      Public
      Python
      •
      Apache License 2.0
      •39•192•1•0•Updated Mar 3, 2022Mar 3, 2022

    • StyleGAN2-Hypotheses-Explorer

      Public
      Implementation of the interactive framework from the paper "Explainability Requires Interactivity". See https://github.com/HealthML/explainability-requires-inte…
      Python
      •
      MIT License
      •0•4•0•0•Updated Sep 17, 2021Sep 17, 2021

    • explainability-requires-interactivity

      Public
      Code to reproduce experiments in the paper "Explainability Requires Interactivity". See https://github.com/HealthML/StyleGAN2-Hypotheses-Explorer/ for the imple…
      Python
      •
      MIT License
      •2•5•0•0•Updated Sep 17, 2021Sep 17, 2021

    • Math4ML-Lecture

      Public
      HPI Mathematics for Machine Learning Lecture
      2•6•0•0•Updated Feb 10, 2021Feb 10, 2021

    • spectral

      Public
      A jekyll theme for the spectral template by html5up.net (@ajlkn). Demo: http://arkadianriver.github.io/spectral. How to jekyll: http://jekyllrb.com/docs/home/. …
      CSS
      •
      Other
      •404•0•0•0•Updated Jan 24, 2021Jan 24, 2021

    • pathology-ml-model-training

      Public
      A tool to enable biologists to train a machine learning model for their pathology images.
      C++
      •
      MIT License
      •1•0•0•0•Updated May 12, 2020May 12, 2020

    • d2l-en

      Public
      Dive into Deep Learning, Berkeley STAT 157 (Spring 2019) textbook. With code, math, and discussions.
      Python
      •
      Other
      •5k•0•0•0•Updated Apr 19, 2020Apr 19, 2020

    • FaST-LMM

      Public
      Python version of Factored Spectrally Transformed Linear Mixed Models
      Python
      •
      Apache License 2.0
      •33•0•0•0•Updated Dec 5, 2019Dec 5, 2019

    • gadgetron

      Public
      Gadgetron - Medical Image Reconstruction Framework
      C++
      •
      Other
      •167•0•0•0•Updated Oct 14, 2019Oct 14, 2019

    • STATS331

      Public
      Lecture notes for an introductory undergraduate course in Bayesian Inference
      TeX
      •
      MIT License
      •9•0•0•0•Updated Sep 10, 2019Sep 10, 2019

    • manim

      Public
      Animation engine for explanatory math videos
      Python
      •
      Other
      •7.2k•0•0•0•Updated Jun 9, 2019Jun 9, 2019

    • mml-book.github.io

      Public
      Companion webpage to the book "Mathematics For Machine Learning"
      2.8k•0•0•0•Updated Mar 17, 2019Mar 17, 2019
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