Fix chunk overlap duplication, glob ingestion, and store reliability - #35

Merged

nmdra merged 29 commits into

fix/chunk-overlap-duplication

Aug 1, 2026

Commits on Jul 31, 2026

chore: remove unused obsidian package and legacy pdfextract files
nmdra
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6d195b8
fix(ingest): store overlap-free chunk text while embedding full text
nmdra
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cb31b02
fix(store): paginate cleanup and graph Gets within FFI limits
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946fc8f
fix(ingest): preserve index when all chunks of a note are filtered
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13c97ac
feat(ingest): persist has_code chunk metadata
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633ee49
fix(parser): preserve unicode in slugs, allowlist attachment extensions
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666a24d
refactor(pdfextract): remove dead tesseract OCR path
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ff109b6
fix(pdfextract): size WASM pool to workers, honor context on acquire
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263a078
fix(llmparse): split PDF pages on rune boundaries within token budget
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f86b283
fix(llmparse): honor model-prefix backends, warn on mismatch, cap Retry-After
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b133ba3
fix(store): clamp search limits, align MatchedQueries, drop redundant filter block
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ac19a35
fix(store): cap written tags to queryable range, deterministic link resolver
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96b288d
fix(store): propagate swallowed query errors, drop dead metadata fields
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5d31237
fix(ingest): salt hashes with embedding model, remove dead embedder code
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75b116f
fix(cmd): remove unreachable ndjson output format
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3464271
fix(configfile): resolve normalized key collisions deterministically
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76959de

Commits on Aug 1, 2026

fix(store): warn once per command on FFI cap, not once per chunk query
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35ecea0
fix(cmd): propagate JSONPath errors so all commands exit non-zero
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50f3bfe
fix(parser): clean image embed noise from chunk text and link index
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147dc20
feat(cmd): detect corrupted ChromaDB in doctor
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4c55d51
docs(wiki): document attachment embeds, JSONPath exit codes, and chunk schema v5
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63daa60
fix(parser): snap chunk boundaries out of placeholder tokens
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777ca0c
fix(ingest): support recursive ** globs via doublestar
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8f00cfe
refactor(parser): replace wikilink if-else chain with switch
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5848938
refactor(embedder): drop pointless goroutine wrapper
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93ba887
fix(ingest): count failed files in progress reporting
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77a893d
fix(store): deterministic link vectors and metadata error propagation
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39733c4
fix(store): guard paginated Get helpers against nil responses
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b23eb64
ci: run tests with the race detector in pre-commit
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b1eb8ec