Skip to content
View hyein-cbio's full-sized avatar
๐Ÿ’ญ
๐Ÿณ๏ธโ€โšง๏ธ
๐Ÿ’ญ
๐Ÿณ๏ธโ€โšง๏ธ
2 followers · 1 following

Achievements

Achievement: Pull Sharkx2Achievement: YOLOAchievement: Pair Extraordinaire

Achievements

Achievement: Pull Sharkx2Achievement: YOLOAchievement: Pair Extraordinaire

Block or report hyein-cbio

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Content in all repositories owned by your account will be closed.
Maximum 250 characters. Please donโ€™t include any personal information such as legal names or email addresses. This note will only be visible to you.
Report abuse

Contact GitHub support about this userโ€™s behavior. Learn more about reporting abuse.

Report abuse
hyein-cbio/README.md

Hyein Cho profile banner

Hyein Cho

Computational biologist interested in genomics, epigenomics, single-cell analysis, and scientific software.

I also tinker with AI-assisted development, developer tooling, and small utilities that make technical workflows a little less painful.

Follow me on X / Twitter!

๐Ÿงฌ Computational biology & genomics

  • epi-SHARE-seq-pipeline โ€” single-cell / single-nucleus multiomic processing pipeline
  • And in-house repositories!

๐Ÿ“Š R & data science, open source contribution

  • excluderanges โ€” genomic range utilities
  • rtracklayer โ€” tools around genomic annotations and tracks
  • amap โ€” R-based data analysis and visualization
  • PoincareMaps โ€” experiments with Poincarรฉ-map based visualization and analysis

๐Ÿค– AI & developer tooling

  • pi-export-notool โ€” lightweight Pi export tooling
  • pi-multilang-alias โ€” multilingual alias helpers for Pi
  • pi-subagents - open source contribution for Pi's Orca interaction
  • orca โ€” open source contribution to multi-agent coding orchestration

๐Ÿ—บ๏ธ Geospatial & web

  • NPNkorea โ€” convert between Korea's National Point Number system and WGS84 coordinates
  • NPNkorea-web โ€” web interface for NPN โ†” WGS84 conversion

This profile is a mix of original projects, research software, experiments, and forks I keep around for development and exploration.

Pinned Loading

  1. NPNkorea NPNkorea Public

    R์„ ์ด์šฉํ•œ GPS ์ขŒํ‘œ์™€ ๊ตญ๊ฐ€์ง€์ ๋ฒˆํ˜ธ์˜ ์ƒํ˜ธ ๋ณ€ํ™˜. R package for converting between WGS84 GPS coordinates and Korea's National Point Number (NPN).

    R

  2. pi-opencode-mode pi-opencode-mode Public

    Use OpenCode CodeMode in Pi alongside native codemode, with bounded output and Pi tool hooks.

    JavaScript

  3. pi-codemode-diff pi-codemode-diff Public

    Show edit and write diffs inside Pi codemode calls without adding them to model context.

    TypeScript 1

  4. pi-multilang-alias pi-multilang-alias Public

    Multilingual and keyboard-layout command aliases for Pi

    TypeScript

  5. dozmorovlab/excluderanges dozmorovlab/excluderanges Public

    Genomic coordinates of problematic genomic regions as GRanges

    R 58 8

  6. rtracklayer rtracklayer Public

    Forked from lawremi/rtracklayer

    R interface to genome annotation files and the UCSC genome browser

    C