setting up CDCWonder_NNDSS_InfectiousAnnual import

statvar_imports/cdc/cdcwonder_nndss_infectiousannual/age_pvmap.csv

@@ -0,0 +1,19 @@
+key,prop,val,,,,
+Year,observationDate,{Number},populationType,MedicalConditionIncident,observationAbout,country/USA
+Age Code:1,age,YearsUpto1,
+Age Code:2,age,Years1To4,
+Age Code:3,age,Years5To14,
+Age Code:4,age,Years15To24,
+Age Code:5,age,Years25To39,
+Age Code:6,age,Years40To64,
+Age Code:7,age,Years65Onwards,
+Age Code:99,age,USC_AgeNotStated,
+
+Case Count,value,{Number},measurementMethod,CDC_NNDSS_Diseases_AnnualTables,observationPeriod,P1Y
+Disease Code:10591,medicalCondition,HaemophilusInfluenzae__InvasiveDisease,serotype,SerotypeB
+Disease Code:10593,medicalCondition,HaemophilusInfluenzae__InvasiveDisease,serotype,NonSerotypeB
+Disease Code:10592,medicalCondition,HaemophilusInfluenzae__InvasiveDisease,serogroup,OtherSerogroups
+Disease Code:10597,medicalCondition,HaemophilusInfluenzae__InvasiveDisease,serotype,UnknownSerotype
+Disease Code:11722,#ignore,unsupported medical condition
+Disease Code:50232,#ignore,unsupported medical condition
+Disease Code:50233,#ignore,unsupported medical condition

statvar_imports/cdc/cdcwonder_nndss_infectiousannual/common_metadata.csv

@@ -0,0 +1,4 @@
+parameter,value
+header_rows,1
+mapped_columns,7
+output_columns,"observationDate,observationAbout,variableMeasured,value,measurementMethod,observationPeriod,#input"

statvar_imports/cdc/cdcwonder_nndss_infectiousannual/diseases_pvmap.csv

@@ -0,0 +1,148 @@
+Disease Code:10350,medicalCondition,AnthraxDisease,,,,
+Disease Code:10073,medicalCondition,Chikungunya,,,,
+Disease Code:10053,medicalCondition,NeuroinvasiveDisease__EasternEquineEncephalitis,,,,
+Disease Code:10078,medicalCondition,NeuroinvasiveDisease__JamestownCanyonVirusDisease,,,,
+Disease Code:10079,medicalCondition,NonNeuroinvasiveDisease__JamestownCanyonVirusDisease,,,,
+Disease Code:10081,medicalCondition,NeuroinvasiveDisease__LaCrosseVirusDisease,,,,
+Disease Code:10082,medicalCondition,NonNeuroinvasiveDisease__LaCrosseVirusDisease,
+Disease Code:10057,medicalCondition,NeuroinvasiveDisease__PowassanVirusDisease,,,,
+Disease Code:10063,medicalCondition,NonNeuroinvasiveDisease__PowassanVirusDisease,,,,
+Disease Code:10051,medicalCondition,NeuroinvasiveDisease__StLouisEncephalitis,,,,
+Disease Code:10064,medicalCondition,NonNeuroinvasiveDisease__StLouisEncephalitis,,,,
+Disease Code:10056,medicalCondition,NeuroinvasiveDisease__WestNileVirusDisease,,,,
+Disease Code:10049,medicalCondition,NonNeuroinvasiveDisease__WestNileVirusDisease,,,,
+Disease Code:12010,medicalCondition,Babesiosis,,,,
+Disease Code:12011,medicalCondition,Babesiosis,medicalStatus,ConfirmedCase,,
+Disease Code:12012,medicalCondition,Babesiosis,medicalStatus,ProbableCase,,
+Disease Code:10360,medicalCondition,Botulism,,,,
+Disease Code:10530,medicalCondition,FoodborneBotulism,,,,
+Disease Code:10540,medicalCondition,InfantBotulism,,,,
+Disease Code:10550,medicalCondition,WoundBotulism,,,,
+Disease Code:10020,medicalCondition,Brucellosis,,,,
+Disease Code:11020,medicalCondition,Campylobacteriosis,,,,
+Disease Code:50263,medicalCondition,CandidaAuris,medicalStatus,ClinicalCase,,
+Disease Code:50264,medicalCondition,CandidaAuris,medicalStatus,Screening,,
+Disease Code:50244,medicalCondition,CarbapenemResistantEnterobacteriaceae,,,,
+Disease Code:10273,medicalCondition,Chancroid,,,,
+Disease Code:10274,medicalCondition,Chlamydia,,,,
+Disease Code:10470,medicalCondition,Cholera,,,,
+Disease Code:11900,medicalCondition,Coccidioidomycosis,,,,
+Disease Code:11901,medicalCondition,Coccidioidomycosis,medicalStatus,ConfirmedCase,,
+Disease Code:11902,medicalCondition,Coccidioidomycosis,medicalStatus,ProbableCase,,
+Disease Code:11065,medicalCondition,COVID19,,,,
+Disease Code:11580,medicalCondition,Cryptosporidiosis,,,,
+Disease Code:11582,medicalCondition,Cryptosporidiosis,medicalStatus,ConfirmedCase,,
+Disease Code:11583,medicalCondition,Cryptosporidiosis,medicalStatus,ProbableCase,,
+Disease Code:11575,medicalCondition,Cyclosporiasis,,,,
+Disease Code:10680,medicalCondition,DengueDisease,,,,
+Disease Code:11704,medicalCondition,DengueLikeIllness,,,,
+Disease Code:11705,medicalCondition,SevereDengue,,,,
+Disease Code:10040,medicalCondition,Diphtheria,,,,
+Disease Code:11090,medicalCondition,HumanGranulocyticAnaplasmosis,,,,
+Disease Code:11088,medicalCondition,HumanMonocyticEhrlichiosis,,,,
+Disease Code:11089,medicalCondition,EhrlichiaEwingiiInfection,,,,
+Disease Code:11091,medicalCondition,Ehrlichiosis,,,,
+Disease Code:11570,medicalCondition,Giardiasis,,,,
+Disease Code:10280,medicalCondition,Gonorrhea,,,,
+Disease Code:10590,medicalCondition,HaemophilusInfluenzae__InvasiveDisease,,,,
+Disease Code:10380,medicalCondition,Leprosy,,,,
+Disease Code:11610,medicalCondition,HaemophilusMeningitis,,,,
+Disease Code:11590,medicalCondition,HantavirusPulmonarySyndrome,,,,
+Disease Code:11550,medicalCondition,PostDiarrheal__HemolyticUremicSyndrome,,,,
+Disease Code:10110,medicalCondition,AcuteCondition__HepatitisA,,,,
+Disease Code:10100,medicalCondition,AcuteCondition__HepatitisB,,,,
+Disease Code:10104,medicalCondition,PerinatalInfection__HepatitisB,,,,
+Disease Code:10101,medicalCondition,AcuteCondition__HepatitisC,,,,
+Disease Code:50228,medicalCondition,AcuteCondition__HepatitisC,medicalStatus,ConfirmedCase,,
+Disease Code:50229,medicalCondition,AcuteCondition__HepatitisC,medicalStatus,ProbableCase,,
+Disease Code:50248,medicalCondition,PerinatalInfection__HepatitisC,,,,
+Disease Code:10560,medicalCondition,HIV_AIDS,,,,
+Disease Code:11061,medicalCondition,Influenza,medicalStatus,PediatricMortality,,
+Disease Code:11723,medicalCondition,StreptococcusPneumonia,,,,
+Disease Code:50230,medicalCondition,StreptococcusPneumonia,medicalStatus,ConfirmedCase,,
+Disease Code:50231,medicalCondition,StreptococcusPneumonia,medicalStatus,ProbableCase
+Disease Code:10490,medicalCondition,LegionnairesDisease,,,,
+Disease Code:10390,medicalCondition,Leptospirosis,,,,
+Disease Code:10640,medicalCondition,Listeriosis,,,,
+Disease Code:10641,medicalCondition,Listeriosis,medicalStatus,ConfirmedCase,,
+Disease Code:10642,medicalCondition,Listeriosis,medicalStatus,ProbableCase,,
+Disease Code:11080,medicalCondition,LymeDisease,,,,
+Disease Code:11081,medicalCondition,LymeDisease,medicalStatus,ConfirmedCase,,
+Disease Code:11082,medicalCondition,LymeDisease,medicalStatus,ProbableCase,,
+Disease Code:10130,medicalCondition,Malaria,,,,
+Disease Code:10140,medicalCondition,Measles,,,,
+Disease Code:10500,medicalCondition,Measles,medicalStatus,IndigenousCase,,
+Disease Code:10510,medicalCondition,Measles,medicalStatus,ImportedCase,,
+Disease Code:10150,medicalCondition,MeningococcalMeningitis,,,
+Disease Code:10151,medicalCondition,MeningococcalMeningitis,serogroup,ACWYSerogroup,,
+Disease Code:10152,medicalCondition,MeningococcalMeningitis,serogroup,SerogroupB,,
+Disease Code:10153,medicalCondition,MeningococcalMeningitis,serogroup,OtherSerogroups,,
+Disease Code:10154,medicalCondition,MeningococcalMeningitis,serogroup,UnknownSerogroups,,
+Disease Code:10180,medicalCondition,Mumps,,,,
+Disease Code:11062,medicalCondition,NovelInfluenzaAViralInfection,,,,
+Disease Code:50236,medicalCondition,Paratyphoid,,,,
+Disease Code:10190,medicalCondition,Pertussis,,,,
+Disease Code:10440,medicalCondition,Plague,,,,
+Disease Code:10410,medicalCondition,ParalyticPoliomyelitis,,,,
+Disease Code:10405,medicalCondition,NonparalyticPoliomyelitis,,,,
+Disease Code:10450,medicalCondition,Psittacosis,,,,
+Disease Code:10259,medicalCondition,QFever,,,,
+Disease Code:10257,medicalCondition,AcuteCondition__QFever,,,,
+Disease Code:10258,medicalCondition,ChronicCondition__QFever,,,,
+Disease Code:10460,medicalCondition,Rabiesinhuman,,,,
+Disease Code:10200,medicalCondition,Rubella,,,,
+Disease Code:10370,medicalCondition,CongenitalDisease__Rubella,,,,
+Disease Code:50266,#ignore,unsupported medical condition,,,,
+Disease Code:50265,medicalCondition,SalmonellosisExceptTyphiAndParatyphi,,,,
+Disease Code:11563,medicalCondition,ShigaToxinEColi,,,,
+Disease Code:11010,medicalCondition,Shigellosis,,,,
+Disease Code:11800,medicalCondition,Smallpox,,,,
+Disease Code:10250,medicalCondition,SpottedFeverRickettsiosis,,,,
+Disease Code:10253,medicalCondition,SpottedFeverRickettsiosis,medicalStatus,ConfirmedCase,,
+Disease Code:10254,medicalCondition,SpottedFeverRickettsiosis,medicalStatus,ProbableCase,,
+Disease Code:11700,medicalCondition,StreptococcalToxicShockSyndrome,,,,
+Disease Code:10399,medicalCondition,Syphilis,,,,
+Disease Code:10316,medicalCondition,CongenitalSyphilis,,,,
+Disease Code:10310,medicalCondition,SyphilisPrimaryAndSecondary,,,,
+Disease Code:10210,medicalCondition,Tetanus,,,,
+Disease Code:10520,medicalCondition,ToxicShockSyndromExceptStreptococcal,,,,
+Disease Code:10270,medicalCondition,Trichinellosis,,,,
+Disease Code:10220,medicalCondition,Tuberculosis,,,,
+Disease Code:10230,medicalCondition,Tularemia,,,,
+Disease Code:10240,medicalCondition,TyphoidFever,,,,
+Disease Code:11663,medicalCondition,VancomycinIntermediateStaphylococcusAureus,,,,
+Disease Code:11665,medicalCondition,VancomycinResistantStaphylococcusAureus,,,,
+Disease Code:10030,medicalCondition,Chickenpox,,,,
+Disease Code:10031,medicalCondition,Chickenpox,medicalStatus,PatientDeceased,
+Disease Code:11545,medicalCondition,VibriosisExcludingCholera,,,,
+Disease Code:50234,medicalCondition,VibriosisExcludingCholera,medicalStatus,ConfirmedCase,,
+Disease Code:50235,medicalCondition,VibriosisExcludingCholera,medicalStatus,ProbableCase,,
+Disease Code:11648,medicalCondition,GuanaritoHemorrhagicFever,,,,
+Disease Code:11638,medicalCondition,JuninHemorrhagicFever,,,,
+Disease Code:11632,medicalCondition,LassaHemorrhagicFever,,,,
+Disease Code:10660,medicalCondition,YellowFever,,,,
+Disease Code:50224,medicalCondition,ZikaVirusDisease__CongenitalDisease,,,,
+Disease Code:50223,medicalCondition,ZikaVirusDisease__NonCongenitalDisease,,,,
+Disease Code:50222,medicalCondition,ZikaVirusInfection__CongenitalDisease,,,,
+Disease Code:50221,medicalCondition,ZikaVirusInfection__NonCongenitalDisease,,,,
+Disease Code:10062,#ignore,unsupported medical condition
+Disease Code:10052,#ignore,unsupported medical condition
+Disease Code:10065,#ignore,unsupported medical condition
+Disease Code:50272,#ignore,unsupported medical condition
+Disease Code:11067,#ignore,unsupported medical condition
+Disease Code:11068,#ignore,unsupported medical condition
+Disease Code:11585,#ignore,unsupported medical condition
+Disease Code:11801,#ignore,unsupported medical condition
+Disease Code:10340,#ignore,unsupported medical condition
+Disease Code:50267,#ignore,unsupported medical condition
+Disease Code:11000,#ignore,unsupported medical condition
+Disease Code:50242,#ignore,unsupported medical condition
+Disease Code:10575,#ignore,unsupported medical condition
+Disease Code:11647,#ignore,unsupported medical condition
+Disease Code:11649,#ignore,unsupported medical condition
+Disease Code:11640,#ignore,unsupported medical condition
+Disease Code:11630,#ignore,unsupported medical condition
+Disease Code:11644,#ignore,unsupported medical condition
+Disease Code:11637,#ignore,unsupported medical condition
+Disease Code:11631,#ignore,unsupported medical condition
+Disease Code:11639,#ignore,unsupported medical condition