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Support null values in Avro string columns - #6307
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Thank you @nenorbot !
I suggest that you
I know that is a bit of a pain -- I can help with the merging if you can do steps 1 and 2 🙏 |
| Value::Bytes(bytes) => String::from_utf8(bytes.to_vec()) | ||
| .map_err(AvroError::ConvertToUtf8) | ||
| .map(Some), | ||
| Value::Null => Ok(None), |
| let exec = | ||
| get_exec(&state, "alltypes_nulls_plain.avro", projection, None).await?; | ||
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| let batches = collect(exec, task_ctx).await?; |
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It might also be worth checking out the https://docs.rs/datafusion/latest/datafusion/macro.assert_batches_eq.html macro to verify the rows / columns in a more easy to maintain wai
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I tried that as well, however since we're explicitly checking for null values, the expected value would be something like
let expected = vec![
"+------------+",
"| string_col |",
"+------------+",
"| |",
"+------------+",
];
... making it hard to differentiate between an empty string and null, so I opted to explicitly test via Array#is_null
Thanks for the help @alamb . I created an additional PR at apache/arrow-testing#90. Do I pin arrow-testing by modifying |
Yes, I think so -- maybe using the |
To be used for the changes in apache/datafusion#6307 file contents: ``` ❯ avro-tools tojson data/avro/alltypes_nulls_plain.avro {"string_col":null,"int_col":null,"bool_col":null,"bigint_col":null,"float_col":null,"double_col":null,"bytes_col":null} ```
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@nenorbot github says this PR has merge conflicts, for reasons I don't understand. Can you possibly merge up from main to fix this? 
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I think it must have been something to do with pulling new commits from |
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I believe github is having issues -- https://www.githubstatus.com/ I restarted the failed check, so hopefully it will pass next 
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I still see some failing checks, but |
I agree - I think github was indeed acting up. I retriggered the failed jobs and hopefully they'll pass this time |
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Thanks again @nenorbot |
2 participants
Which issue does this PR close?
Closes #6305 .
What changes are included in this PR?
Add null handling for string values when converting Avro to Arrow.
Are these changes tested?
I have added unit-tests to check the conversion happens properly (for string columns as well as for several other data types). To do so I had to generate a new Avro file containing null values under
testing/data/avro. Since this file resides in thearrow-testingrepo, it is not part of this PR (and therefore the tests will fail) -- if these changes are approved I'll follow-up with an additional PR to add the new file toarrow-testing. Please let me know if there's a better way to go about this other than splitting to separate PRs.Are there any user-facing changes?
No